EdCenter- Molecular Biology Chemistry Worksheet

 
 http://www.edcenter.sdsu.edu/repository/Mbcw/mbcwapp.html
 
Molecular Applications 
(NPACI Tools)
 
Biology Workbench 
The Biology WorkBench provides a point and click interface for rapid access of biological databases and analysis 
tools.
EC-CSE Project -
Biology Workbench
Overview
MEME 
A tool for discovering motifs (repeatedly occuring sequence patterns) in a group of related DNA or protein sequences.
MICE 
A Web based tool that allows researchers at different locations to visualize synchronously complex models of molecular structure.
The Protein Kinase Resource (PKR) 
A web accessible resource of information on the protein kinase family of enzymes, with tools for structural and computational analyses.
Telemicroscopy 
Internet-based collaboration in visualizing 3D cellular structures with an electron microscope.
MOOSE 
Macromolecular Object-Oriented Search Engine: a Web-based biochemical information resource, which allows biologists to examine the similarity of proteins.
CMS Molecular Biology Resource 
A collection of Internet-accessible tools and databases on protein analyses and biochemistry, DNA/RNA analyses and molecular modelling. 
Nucleic Acid Database 
This assembles and distributes structural information about nucleic acids with access to a variety of macromolecular structure databases.
National Biomedical Computation Resource 
A collection of projects and resources related to molecular modelling and studying molecular dynamics on parallel computers.
GAMESS 
A molecular visual analysis program, the software allows for analysis of energy-minimized structure of a molecule.
POLYRATE/MORATE 
The calculation of rate constants and tunneling probabilities in chemical reactions. 
 

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